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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790311.1_cds_XP_016501105.1_1406
CDS Infomation

[gene=LOC107819505] [db_xref=GeneID:107819505] [protein=hydroxyproline O-galactosyltransferase HPGT1-like] [protein_id=XP_016501105.1] [location=join(31202..31314,31398..31461,32405..32454,32545..32735,34800..34863,34941..35013,35483..35606,35774..35861,35979..36029,37519..37590,37673..37785,37977..37999)] [gbkey=CDS]
Sequence

ATGCAGAGCCGGGGATCCAATGCCCGGTTCTCAGGAATGGGGACGCGATCCCCGATTTCA
TCTCTCATGCTTGCCATGTTCGCTACCATGGCTTCCTTCTATGTCGCCGGCCGCTTATGG
CAAGATGCACAAAACAGGGTTTACTTAACAAAAGAGCTCGATAGAATAACCGGTCAGGGA
CACTCTGCAATATCTGTGGATGACACATTAAAGATCATAGAATGCAGGGAGCAAAGGAAG
AAACTATCTGCCCTAGAGATGGAACTGGCAGCTGCTAGACAGGAAGGATTTATCTCCAAA
CAATCATCAGATATGAAGAGAACTAATGAAAAGGGTCCAGTAATAGTAATAGGAATTTTC
ACAAGATTTGGGCGCAAGAACGAGAGAGATGCTATAAGGAAGGCATGGATGTCAACTGGT
GCAGCTTTGAAAAAAATGGAGGAAGAAAAGGGCATTGTTGCACGTTTTGTCATTGGCAGA
AGTGCTAATCGTGGAGACAGCTTGGACAGGAGCATTGACAGTGAAAACAGTCAAACTAAT
GATTTTTTTATTCTTGAAAATCATGTTGAAGCTCCCGAGGAACTCCCAATGAAAACAAAG
CTGTTTTTTGCACATGCATCAGACAGTTGGAATGCTGACTTCTATGCCAAAGTCAATGAC
AATGTCTTTGTAAACCTTGATTCCTTGGGAAATACACTTGCGTCATATTTGAGTGTCCCT
CGTGTATATATTGGGTGCATGAAATCAGGCGAAGTTTTCTCTGAGAAGGGCCAGAAATGG
TATGAACCAGATTGGTGGAAATTTGGAGATGGGAAAACGTACTTCCGTCATGCTTCCACA
GAGCTGTTCGTAATATCTCAAGCGCTGGCTAGATACATTTCAATAAATAGATCCCTACTC
CGTATTTATGCACATGATGATGTCAGTGTTGGGTCCTGGTTTATTGGTGCCGATGTCAAA
CATGTAGATGAGAGGAAGTTTTGCTGCTCGTCTTGGTCATCAGGAGCCATTTGTTCGGGA
GTGTGA

Peptide Sequence

PEP ID

XP_016501105.1
PEP Infomation

PREDICTED: hydroxyproline O-galactosyltransferase HPGT1-like [Nicotiana tabacum]
Sequence

MQSRGSNARFSGMGTRSPISSLMLAMFATMASFYVAGRLWQDAQNRVYLTKELDRITGQG
HSAISVDDTLKIIECREQRKKLSALEMELAAARQEGFISKQSSDMKRTNEKGPVIVIGIF
TRFGRKNERDAIRKAWMSTGAALKKMEEEKGIVARFVIGRSANRGDSLDRSIDSENSQTN
DFFILENHVEAPEELPMKTKLFFAHASDSWNADFYAKVNDNVFVNLDSLGNTLASYLSVP
RVYIGCMKSGEVFSEKGQKWYEPDWWKFGDGKTYFRHASTELFVISQALARYISINRSLL
RIYAHDDVSVGSWFIGADVKHVDERKFCCSSWSSGAICSGV

Transcript Sequence

Gene sequence data has not been registered.